Gene: Carub.0008s2406

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s2406
  • Transcript Identifier Carub.0008s2406.1
  • Gene Type Coding gene
  • Location scaffold_8 : 11713319-11714956 : negative

Gene Family Information

  • ID HOM05D000749
  • #Genes/#Species 779/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s2406.v1.1
  • pacid 39251552
  • synonym Carubv10027041m.g

Descriptions

  • Description PTHR11349:SF44 - NUCLEOSIDE DIPHOSPHATE KINASE II, CHLOROPLASTIC
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006165
IEA
InterPronucleoside diphosphate phosphorylation
GO:0006183
IEA
InterProGTP biosynthetic process
GO:0006228
IEA
InterProUTP biosynthetic process
GO:0006241
IEA
InterProCTP biosynthetic process
GO:0009585
ISO
PLAZA Integrative Orthologyred, far-red light phototransduction AT5G63310
GO:0009411
ISO
PLAZA Integrative Orthologyresponse to UV AT5G63310
GO:0042542
ISO
PLAZA Integrative Orthologyresponse to hydrogen peroxide AT5G63310
GO:0009734
ISO
PLAZA Integrative Orthologyauxin-activated signaling pathway AT5G63310

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004550
IEA
InterPronucleoside diphosphate kinase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G63310

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G63310
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G63310
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G63310
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G63310
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT5G63310
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT5G63310

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034907 Nucleoside diphosphate kinase-like domain
IPR001564 Nucleoside diphosphate kinase
IPR036850 Nucleoside diphosphate kinase-like domain superfamily
Mapman id Description
6.3.2.4 Nucleotide metabolism.deoxynucleotides.salvage pathway.nucleoside diphosphate kinase