Gene: Carub.0008s1788

General Information

Structural Information

Species Capsella rubella
Gene Identifier Carub.0008s1788
Transcript Identifier Carub.0008s1788.1
Gene Type Coding gene
Location scaffold_8 : 9404877-9407655 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002128
#Genes/#Species 314/96
Phylogenetic origin

ID ORTHO05D002497
#Genes/#Species 284/95
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id Carub.0008s1788.v1.1
pacid 39251690
synonym Carubv10026103m.g

Descriptions

Short descriptions
Ortholog descriptions

Description PTHR23244//PTHR23244:SF313 - KELCH REPEAT DOMAIN // ADAGIO PROTEIN 1

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009908	ISO	PLAZA Integrative Orthology	flower development	AT5G57360
GO:0043153	ISO	PLAZA Integrative Orthology	entrainment of circadian clock by photoperiod	AT5G57360
GO:0031146	ISO	PLAZA Integrative Orthology	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	AT5G57360
GO:0007623	ISO	PLAZA Integrative Orthology	circadian rhythm	AT5G57360
GO:0042752	ISO	PLAZA Integrative Orthology	regulation of circadian rhythm	AT5G57360
GO:0010114	ISO	PLAZA Integrative Orthology	response to red light	AT5G57360
GO:0006511	ISO	PLAZA Integrative Orthology	ubiquitin-dependent protein catabolic process	AT5G57360
GO:0010498	ISO	PLAZA Integrative Orthology	proteasomal protein catabolic process	AT5G57360

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0009882	ISO	PLAZA Integrative Orthology	blue light photoreceptor activity	AT5G57360

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT5G57360
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT5G57360
GO:0019005	ISO	PLAZA Integrative Orthology	SCF ubiquitin ligase complex	AT5G57360

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR000014	PAS domain
IPR001810	F-box domain
IPR015915	Kelch-type beta propeller
IPR036047	F-box-like domain superfamily
IPR035965	PAS domain superfamily
IPR011498	Kelch repeat type 2

Mapman id	Description
26.1.2.3.1	External stimuli response.light.UV-A/blue light.zeitlupe-mediated photoperception.substrate adaptor of SCF E3 ubiquitin ligase complex (ADO)