Gene: Carub.0008s1708

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s1708
  • Transcript Identifier Carub.0008s1708.1
  • Gene Type Coding gene
  • Location scaffold_8 : 9047208-9048134 : negative

Gene Family Information

  • ID HOM05D000996
  • #Genes/#Species 607/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s1708.v1.1
  • pacid 39252298
  • synonym Carubv10027731m.g

Descriptions

  • Description K05759 - profilin (PFN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042989
ISO
PLAZA Integrative Orthologysequestering of actin monomers Zm00001eb376740
GO:0007097
ISO
PLAZA Integrative Orthologynuclear migration Zm00001eb376740
GO:0030041
ISO
PLAZA Integrative Orthologyactin filament polymerization AT5G56600
GO:0090351
ISO
PLAZA Integrative Orthologyseedling development AT5G56600
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT5G56600
GO:0048527
ISO
PLAZA Integrative Orthologylateral root development AT5G56600
GO:0051510
ISO
PLAZA Integrative Orthologyregulation of unidimensional cell growth AT5G56600
GO:0030845
ISO
PLAZA Integrative Orthologyphospholipase C-inhibiting G protein-coupled receptor signaling pathway Zm00001eb376740
GO:0032956
ISO
PLAZA Integrative Orthologyregulation of actin cytoskeleton organization Zm00001eb376740

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003779
IEA
InterProactin binding
GO:0043621
ISO
PLAZA Integrative Orthologyprotein self-association Zm00001eb376740
GO:0003785
ISO
PLAZA Integrative Orthologyactin monomer binding Zm00001eb376740
GO:0070064
ISO
PLAZA Integrative Orthologyproline-rich region binding Zm00001eb376740
GO:0005546
ISO
PLAZA Integrative Orthologyphosphatidylinositol-4,5-bisphosphate binding Zm00001eb376740

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G56600
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT5G56600

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR005455 Profilin
IPR036140 Profilin superfamily
Mapman id Description
20.2.2.3 Cytoskeleton organisation.microfilament network.actin polymerisation.profilin actin nucleation protein