Gene: Carub.0008s1520

General Information

Structural Information

Species Capsella rubella
Gene Identifier Carub.0008s1520
Transcript Identifier Carub.0008s1520.1
Gene Type Coding gene
Location scaffold_8 : 8405379-8408091 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000561
#Genes/#Species 984/100
Phylogenetic origin

ID ORTHO05D000514
#Genes/#Species 826/99
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id Carub.0008s1520.v1.1
pacid 39250597
synonym Carubv10026566m.g

Descriptions

Short descriptions
Ortholog descriptions

Description PTHR24012//PTHR24012:SF333 - FAMILY NOT NAMED // POLYADENYLATE-BINDING PROTEIN RBP45B-RELATED

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Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0051028	ISO	PLAZA Integrative Orthology	mRNA transport	Os04g0625800

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	Os04g0625800
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT5G54900

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	Os04g0625800
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	Os04g0625800
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT5G54900

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR035979	RNA-binding domain superfamily
IPR000504	RNA recognition motif domain
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily

Mapman id	Description
16.8.4	RNA processing.mRNA sequestration.mRNA-binding regulatory factor (RBP45/47)