Gene: Carub.0008s1354

General Information

Structural Information

Species Capsella rubella
Gene Identifier Carub.0008s1354
Transcript Identifier Carub.0008s1354.1
Gene Type Coding gene
Location scaffold_8 : 7722746-7724024 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000390
#Genes/#Species 1264/97
Phylogenetic origin

ID ORTHO05D000577
#Genes/#Species 766/97
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id Carub.0008s1354.v1.1
pacid 39250202
synonym Carubv10026816m.g

Descriptions

Short descriptions
Ortholog descriptions

Description PTHR10315//PTHR10315:SF41 - SEVEN IN ABSENTIA HOMOLOG // E3 UBIQUITIN-PROTEIN LIGASE SINAT5

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006511	IEA	InterPro	ubiquitin-dependent protein catabolic process
GO:0007275	IEA	InterPro	multicellular organism development
GO:0016567	ISO	PLAZA Integrative Orthology	protein ubiquitination	AT5G53360

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005737	IEA	InterPro	cytoplasm

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR008974	TRAF-like
IPR018121	Seven-in-absentia protein, TRAF-like domain

Mapman id	Description
19.2.2.1.4.3.5	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.E3 ubiquitin ligase (SINA)