Gene: Carub.0008s0900

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s0900
  • Transcript Identifier Carub.0008s0900.1
  • Gene Type Coding gene
  • Location scaffold_8 : 5801172-5803071 : negative

Gene Family Information

  • ID HOM05D000036
  • #Genes/#Species 5053/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s0900.v1.1
  • pacid 39251644
  • synonym Carubv10027546m.g

Descriptions

  • Description PTHR31707:SF13 - PECTINESTERASE/PECTINESTERASE INHIBITOR 21-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042545
IEA
InterProcell wall modification
GO:0048359
ISO
PLAZA Integrative Orthologymucilage metabolic process involved in seed coat development AT5G49180
GO:0048358
ISO
PLAZA Integrative Orthologymucilage pectin biosynthetic process AT5G49180

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030599
IEA
InterPropectinesterase activity
GO:0004857
IEA
InterProenzyme inhibitor activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035513 Invertase/pectin methylesterase inhibitor domain superfamily
IPR011050 Pectin lyase fold/virulence factor
IPR000070 Pectinesterase, catalytic
IPR006501 Pectinesterase inhibitor domain
IPR012334 Pectin lyase fold
Mapman id Description
21.3.1.2.1 Cell wall organisation.pectin.homogalacturonan.modification and degradation.pectin methylesterase