Gene: Carub.0008s0413

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0008s0413
  • Transcript Identifier Carub.0008s0413.1
  • Gene Type Coding gene
  • Location scaffold_8 : 1717071-1718699 : positive

Gene Family Information

  • ID HOM05D000282
  • #Genes/#Species 1541/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0008s0413.v1.1
  • pacid 39251317
  • synonym Carubv10027611m.g

Descriptions

  • Description K07375 - tubulin beta (TUBB)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0007017
IEA
InterPromicrotubule-based process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005200
IEA
InterProstructural constituent of cytoskeleton
GO:0005525
IEA
InterProGTP binding
GO:0003924
IEA
InterProGTPase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G44340
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G44340

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005874
IEA
InterPromicrotubule
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G44340
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT5G44340
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT5G44340
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT5G44340
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT5G44340
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G44340

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002453 Beta tubulin
IPR018316 Tubulin/FtsZ, 2-layer sandwich domain
IPR037103 Tubulin/FtsZ-like, C-terminal domain
IPR003008 Tubulin/FtsZ, GTPase domain
IPR008280 Tubulin/FtsZ, C-terminal
IPR023123 Tubulin, C-terminal
IPR036525 Tubulin/FtsZ, GTPase domain superfamily
IPR000217 Tubulin
Mapman id Description
20.1.1.2 Cytoskeleton organisation.microtubular network.alpha-beta-Tubulin heterodimer.component beta-Tubulin