Gene: Carub.0007s2549
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0007s2549
- Transcript Identifier Carub.0007s2549.1
- Gene Type Coding gene
- Location scaffold_7 : 9690246-9692814 : positive
Gene Family Information
- ID HOM05D001306
- #Genes/#Species 481/97
- Phylogenetic origin
- ID ORTHO05D001159
- #Genes/#Species 471/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0007s2549.v1.1
- pacid 39233505
- synonym Carubv10006523m.g
Descriptions
- Description PTHR31052//PTHR31052:SF3 - FAMILY NOT NAMED // COBRA-LIKE PROTEIN 7-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010215 | IEA | InterPro | cellulose microfibril organization |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031225 | IEA | InterPro | anchored component of membrane | |
| GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT4G16120 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT4G16120 |
| GO:0005768 | ISO | PLAZA Integrative Orthology | endosome | AT4G16120 |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT4G16120 |
| GO:0046658 | ISO | PLAZA Integrative Orthology | anchored component of plasma membrane | AT4G16120 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006918 | COBRA, plant |
| Mapman id | Description |
|---|---|
| 21.1.2.2 | Cell wall organisation.cellulose.cellulose-hemicellulose network assembly.regulatory protein (COB) |