Gene: Carub.0007s2005
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0007s2005
- Transcript Identifier Carub.0007s2005.1
- Gene Type Coding gene
- Location scaffold_7 : 7520515-7524357 : positive
Gene Family Information
- ID HOM05D000013
- #Genes/#Species 7509/94
- Phylogenetic origin
- ID ORTHO05D000011
- #Genes/#Species 5537/91
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0007s2005.v1.1
- pacid 39233485
- synonym Carubv10007030m.g
Descriptions
- Description PTHR27002//PTHR27002:SF93 - FAMILY NOT NAMED // RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-6-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006468 | IEA | InterPro | protein phosphorylation | |
| GO:0048544 | IEA | InterPro | recognition of pollen |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004672 | IEA | InterPro | protein kinase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004674 | IEA | InterPro | protein serine/threonine kinase activity | |
| GO:0031625 | ISO | PLAZA Integrative Orthology | ubiquitin protein ligase binding | AT4G21380 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT4G21380 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT4G21380 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT4G21380 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003609 | PAN/Apple domain |
| IPR036426 | Bulb-type lectin domain superfamily |
| IPR001480 | Bulb-type lectin domain |
| IPR000719 | Protein kinase domain |
| IPR022126 | S-locus, receptor kinase |
| IPR000858 | S-locus glycoprotein domain |
| IPR001245 | Serine-threonine/tyrosine-protein kinase, catalytic domain |
| IPR024171 | S-receptor-like serine/threonine-protein kinase |
| IPR011009 | Protein kinase-like domain superfamily |
| IPR021820 | S-locus receptor kinase, C-terminal |
| Mapman id | Description |
|---|---|
| 18.4.1.24.1 | Protein modification.phosphorylation.TKL protein kinase superfamily.G-Lectin protein kinase families.protein kinase (SD-1) |