Gene: Carub.0006s3649

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0006s3649
  • Transcript Identifier Carub.0006s3649.1
  • Gene Type Coding gene
  • Location scaffold_6 : 16322451-16326963 : positive

Gene Family Information

  • ID HOM05D000226
  • #Genes/#Species 1818/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0006s3649.v1.1
  • pacid 39247768
  • synonym Carubv10000257m.g

Descriptions

  • Description KOG0483//KOG0843 - Transcription factor HEX, contains HOX and HALZ domains // Transcription factor EMX1 and related HOX domain proteins
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT4G00730
GO:0009827
ISO
PLAZA Integrative Orthologyplant-type cell wall modification AT4G00730
GO:0006723
ISO
PLAZA Integrative Orthologycuticle hydrocarbon biosynthetic process AT4G00730
GO:0043481
ISO
PLAZA Integrative Orthologyanthocyanin accumulation in tissues in response to UV light AT4G00730
GO:0048765
ISO
PLAZA Integrative Orthologyroot hair cell differentiation AT4G00730

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0008289
IEA
InterProlipid binding
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT4G00730

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001356 Homeobox domain
IPR002913 START domain
IPR009057 Homeobox-like domain superfamily
IPR042160 Homeobox-leucine zipper protein GLABRA2/ANL2/PDF2/ATML1-like
Mapman id Description
15.5.3.3 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP IV)