Gene: Carub.0006s2280

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0006s2280
  • Transcript Identifier Carub.0006s2280.1
  • Gene Type Coding gene
  • Location scaffold_6 : 8645480-8646903 : positive

Gene Family Information

  • ID HOM05D001051
  • #Genes/#Species 579/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0006s2280.v1.1
  • pacid 39248324
  • synonym Carubv10001230m.g

Descriptions

  • Description PTHR31319//PTHR31319:SF4 - FAMILY NOT NAMED // ZINC FINGER PROTEIN CONSTANS-LIKE 3-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032922
ISO
PLAZA Integrative Orthologycircadian regulation of gene expression AT5G24930
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT5G24930
GO:0048579
ISO
PLAZA Integrative Orthologynegative regulation of long-day photoperiodism, flowering Os07g0261200

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os07g0261200
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT5G24930

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000315 B-box-type zinc finger
IPR010402 CCT domain
Mapman id Description
15.5.1.2 RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.transcription factor (BBX-CO)