Gene: Carub.0006s2221

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0006s2221
  • Transcript Identifier Carub.0006s2221.1
  • Gene Type Coding gene
  • Location scaffold_6 : 8359329-8361847 : positive

Gene Family Information

  • ID HOM05D000482
  • #Genes/#Species 1101/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0006s2221.v1.1
  • pacid 39247110
  • synonym Carubv10000403m.g

Descriptions

  • Description PTHR31645//PTHR31645:SF4 - FAMILY NOT NAMED // METAL-NICOTIANAMINE TRANSPORTER YSL2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010043
ISO
PLAZA Integrative Orthologyresponse to zinc ion AT5G24380
GO:0006826
ISO
PLAZA Integrative Orthologyiron ion transport AT5G24380
GO:0010039
ISO
PLAZA Integrative Orthologyresponse to iron ion AT5G24380

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0035673
IEA
InterProoligopeptide transmembrane transporter activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G24380

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR045035 Metal-nicotianamine transporter YSL-like
IPR004813 Oligopeptide transporter, OPT superfamily
Mapman id Description
24.2.10.1 Solute transport.carrier-mediated transport.OPT family.iron chelator transporter (YSL)
25.4.2.2.2 Nutrient uptake.metal homeostasis.iron.chelation-based strategy uptake.ferric cation-chelator transporter (YSL)