Gene: Carub.0006s1539

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0006s1539
  • Transcript Identifier Carub.0006s1539.1
  • Gene Type Coding gene
  • Location scaffold_6 : 5690525-5692320 : negative

Gene Family Information

  • ID HOM05D000037
  • #Genes/#Species 5045/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0006s1539.v1.1
  • pacid 39249712
  • synonym Carubv10003473m.g

Descriptions

  • Description K01184 - polygalacturonase (E3.2.1.15)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004650
IEA
InterPropolygalacturonase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000743 Glycoside hydrolase, family 28
IPR011050 Pectin lyase fold/virulence factor
IPR006626 Parallel beta-helix repeat
IPR012334 Pectin lyase fold
Mapman id Description
50.3.2 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase