Gene: Carub.0005s1291
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0005s1291
- Transcript Identifier Carub.0005s1291.1
- Gene Type Coding gene
- Location scaffold_5 : 7328865-7329866 : positive
Gene Family Information
- ID HOM05D000196
- #Genes/#Species 1985/100
- Phylogenetic origin
- ID ORTHO05D001288
- #Genes/#Species 439/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0005s1291.v1.1
- pacid 39224655
- synonym Carubv10017603m.g
Descriptions
- Description PTHR31442//PTHR31442:SF6 - FAMILY NOT NAMED // DNA-BINDING DOMAIN-CONTAINING PROTEIN-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0000160 | ISO | PLAZA Homology (enrichment) | phosphorelay signal transduction system | HOM05D000196 |
| GO:0010468 | ISO | PLAZA Integrative Orthology | regulation of gene expression | AT3G46640 |
| GO:0007623 | ISO | PLAZA Integrative Orthology | circadian rhythm | AT3G46640 |
| GO:0042753 | ISO | PLAZA Integrative Orthology | positive regulation of circadian rhythm | AT3G46640 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0003677 | IEA | InterPro | DNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G46640 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 27.1.6.3.1 | Multi-process regulation.circadian clock system.evening element regulation.Evening Complex (EC).component LUX |