Gene: Carub.0004s2889
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0004s2889
- Transcript Identifier Carub.0004s2889.1
- Gene Type Coding gene
- Location scaffold_4 : 14278291-14279640 : positive
Gene Family Information
- ID HOM05D001840
- #Genes/#Species 355/99
- Phylogenetic origin
- ID ORTHO05D002076
- #Genes/#Species 320/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0004s2889.v1.1
- pacid 39238653
- synonym Carubv10023205m.g
Descriptions
- Description 1.14.19.4 - Delta(8)-fatty-acid desaturase / SLD
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006629 | IEA | InterPro | lipid metabolic process | |
| GO:0070417 | ISO | PLAZA Integrative Orthology | cellular response to cold | AT2G46210 |
| GO:0030148 | ISO | PLAZA Integrative Orthology | sphingolipid biosynthetic process | AT2G46210 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0052631 | ISO | PLAZA Integrative Orthology | sphingolipid delta-8 desaturase activity | AT2G46210 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016021 | IEA | InterPro | integral component of membrane | |
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT2G46210 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 5.4.10 | Lipid metabolism.sphingolipid biosynthesis.delta-8 sphingolipid desaturase (SLD) |