Gene: Carub.0004s2653
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0004s2653
- Transcript Identifier Carub.0004s2653.1
- Gene Type Coding gene
- Location scaffold_4 : 13416081-13418615 : negative
Gene Family Information
- ID HOM05D001480
- #Genes/#Species 429/100
- Phylogenetic origin
- ID ORTHO05D001331
- #Genes/#Species 430/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0004s2653.v1.1
- pacid 39238986
- synonym Carubv10025271m.g
Descriptions
- Description PTHR22792//PTHR22792:SF52 - LUPUS LA PROTEIN-RELATED // LA-RELATED PROTEIN 6B
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006396 | IEA | InterPro | RNA processing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT2G43970 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:1990904 | IEA | InterPro | ribonucleoprotein complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR035979 | RNA-binding domain superfamily |
| IPR036390 | Winged helix DNA-binding domain superfamily |
| IPR034878 | Plant La-related protein, RNA recognition motif |
| IPR006630 | La-type HTH domain |
| IPR002344 | Lupus La protein |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |