Gene: Carub.0004s2622
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0004s2622
- Transcript Identifier Carub.0004s2622.1
- Gene Type Coding gene
- Location scaffold_4 : 13316485-13318952 : positive
Gene Family Information
- ID HOM05D000156
- #Genes/#Species 2379/100
- Phylogenetic origin
- ID ORTHO05D004238
- #Genes/#Species 186/92
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0004s2622.v1.1
- pacid 39237426
- synonym Carubv10022727m.g
Descriptions
- Description PTHR32295//PTHR32295:SF18 - FAMILY NOT NAMED // PROTEIN IQ-DOMAIN 14-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009834 | ISO | PLAZA Integrative Orthology | plant-type secondary cell wall biogenesis | AT2G43680 |
| GO:0010089 | ISO | PLAZA Integrative Orthology | xylem development | AT2G43680 |
| GO:2000652 | ISO | PLAZA Integrative Orthology | regulation of secondary cell wall biogenesis | AT2G43680 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000048 | IQ motif, EF-hand binding site |
| Mapman id | Description |
|---|---|
| 20.6.2 | Cytoskeleton organisation.cytoskeleton-plasma membrane-cell wall interface.microtubule - plasma membrane linkage regulator (IQD13) |