Gene: Carub.0004s2512

General Information

Structural Information

Species Capsella rubella
Gene Identifier Carub.0004s2512
Transcript Identifier Carub.0004s2512.1
Gene Type Coding gene
Location scaffold_4 : 12947904-12949124 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001990
#Genes/#Species 332/99
Phylogenetic origin

ID ORTHO05D002033
#Genes/#Species 325/99
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id Carub.0004s2512.v1.1
pacid 39238748
synonym Carubv10024275m.g

Descriptions

Short descriptions
Ortholog descriptions

Description K03627 - putative transcription factor (MBF1)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0045893	ISO	PLAZA Integrative Orthology	positive regulation of transcription, DNA-templated	AT2G42680

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003677	IEA	InterPro	DNA binding
GO:0003713	ISO	PLAZA Integrative Orthology	transcription coactivator activity	AT2G42680
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT2G42680

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005730	ISO	PLAZA Integrative Orthology	nucleolus	AT2G42680

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR013729	Multiprotein bridging factor 1, N-terminal
IPR001387	Cro/C1-type helix-turn-helix domain
IPR010982	Lambda repressor-like, DNA-binding domain superfamily

Mapman id	Description
35.1	not assigned.annotated