Gene: Carub.0004s2272
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0004s2272
- Transcript Identifier Carub.0004s2272.1
- Gene Type Coding gene
- Location scaffold_4 : 12050082-12050942 : negative
Gene Family Information
- ID HOM05D000060
- #Genes/#Species 4064/97
- Phylogenetic origin
- ID ORTHO05D003150
- #Genes/#Species 241/91
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Carub.0004s2272.v1.1
- pacid 39236266
- synonym Carubv10024002m.g
Descriptions
- Description PTHR31301//PTHR31301:SF2 - FAMILY NOT NAMED // LOB DOMAIN-CONTAINING PROTEIN 15
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:1905177 | ISO | PLAZA Integrative Orthology | tracheary element differentiation | AT2G40470 |
| GO:0010628 | ISO | PLAZA Integrative Orthology | positive regulation of gene expression | AT2G40470 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G40470 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT2G40470 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G40470 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004883 | Lateral organ boundaries, LOB |
| Mapman id | Description |
|---|---|
| 15.5.24 | RNA biosynthesis.transcriptional regulation.transcription factor (AS2/LOB) |