Gene: Carub.0004s1456

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0004s1456
  • Transcript Identifier Carub.0004s1456.1
  • Gene Type Coding gene
  • Location scaffold_4 : 8855177-8856777 : negative

Gene Family Information

  • ID HOM05D000407
  • #Genes/#Species 1240/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0004s1456.v1.1
  • pacid 39238214
  • synonym Carubv10024024m.g

Descriptions

  • Description PTHR21136//PTHR21136:SF95 - SNARE PROTEINS // VESICLE-ASSOCIATED MEMBRANE PROTEIN 721-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0072659
ISO
PLAZA Integrative Orthologyprotein localization to plasma membrane AT2G33120
GO:0034976
ISO
PLAZA Integrative Orthologyresponse to endoplasmic reticulum stress AT2G33120
GO:0009920
ISO
PLAZA Integrative Orthologycell plate formation involved in plant-type cell wall biogenesis AT2G33120
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT2G33120

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
InterProintegral component of membrane
GO:0005768
ISO
PLAZA Integrative Orthologyendosome AT2G33120
GO:0005783
ISO
PLAZA Integrative Orthologyendoplasmic reticulum AT2G33110
GO:0009504
ISO
PLAZA Integrative Orthologycell plate AT2G33120
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT2G33120

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010908 Longin domain
IPR011012 Longin-like domain superfamily
IPR001388 Synaptobrevin
Mapman id Description
13.4.2.3.4 Cell cycle organisation.cytokinesis.cell-plate formation.SNARE cell-plate vesicle fusion complex.R-SNARE component VAMP721/VAMP722
22.3.5.1.5.1 Vesicle trafficking.post-Golgi trafficking.target membrane fusion.membrane fusion complexes.R-type SNARE longin components.VAMP7-group component