Gene: Carub.0004s1404

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0004s1404
  • Transcript Identifier Carub.0004s1404.1
  • Gene Type Coding gene
  • Location scaffold_4 : 8661380-8664010 : negative

Gene Family Information

  • ID HOM05D000053
  • #Genes/#Species 4369/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0004s1404.v1.1
  • pacid 39238385
  • synonym Carubv10025247m.g

Descriptions

  • Description PF00560//PF13855 - Leucine Rich Repeat (LRR_1) // Leucine rich repeat (LRR_8)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032491
ISO
PLAZA Integrative Orthologydetection of molecule of fungal origin AT2G32680
GO:0002237
ISO
PLAZA Integrative Orthologyresponse to molecule of bacterial origin AT2G32680
GO:0002238
ISO
PLAZA Integrative Orthologyresponse to molecule of fungal origin AT2G32680
GO:0007165
ISO
PLAZA Integrative Orthologysignal transduction AT2G32680
GO:0002229
ISO
PLAZA Integrative Orthologydefense response to oomycetes AT2G32680
GO:0140426
ISO
PLAZA Integrative OrthologyPAMP-triggered immunity signalling pathway AT2G32680
GO:0002758
ISO
PLAZA Integrative Orthologyinnate immune response-activating signal transduction AT2G32680
GO:0010555
ISO
PLAZA Integrative Orthologyresponse to mannitol AT2G32680
GO:0002240
ISO
PLAZA Integrative Orthologyresponse to molecule of oomycetes origin AT2G32680
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT2G32680
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT2G32680

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0019901
ISO
PLAZA Integrative Orthologyprotein kinase binding AT2G32680

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001611 Leucine-rich repeat
IPR032675 Leucine-rich repeat domain superfamily
IPR003591 Leucine-rich repeat, typical subtype
Mapman id Description
35.1 not assigned.annotated