Gene: Carub.0004s0941
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0004s0941
- Transcript Identifier Carub.0004s0941.1
- Gene Type Coding gene
- Location scaffold_4 : 6727495-6731767 : negative
Gene Family Information
- ID HOM05D000140
- #Genes/#Species 2610/97
- Phylogenetic origin
- ID ORTHO05D000087
- #Genes/#Species 2327/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Carub.0004s0941.v1.1
- pacid 39236912
- synonym Carubv10025350m.g
Descriptions
- Description PTHR23421:SF58 - BETA-GALACTOSIDASE 8
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0030246 | IEA | InterPro | carbohydrate binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT2G28470 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR008979 | Galactose-binding-like domain superfamily |
| IPR017853 | Glycoside hydrolase superfamily |
| IPR031330 | Glycoside hydrolase 35, catalytic domain |
| IPR001944 | Glycoside hydrolase, family 35 |
| IPR041392 | Beta-galactosidase, beta-sandwich domain |
| IPR000922 | D-galactoside/L-rhamnose binding SUEL lectin domain |
| IPR043159 | D-galactoside/L-rhamnose binding SUEL lectin domain superfamily |
| Mapman id | Description |
|---|---|
| 21.3.2.2.3 | Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase (BGAL) |