Gene: Carub.0004s0860
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0004s0860
- Transcript Identifier Carub.0004s0860.1
- Gene Type Coding gene
- Location scaffold_4 : 6244633-6246153 : positive
Gene Family Information
- ID HOM05D001688
- #Genes/#Species 383/97
- Phylogenetic origin
- ID ORTHO05D001571
- #Genes/#Species 387/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Carub.0004s0860.v1.1
- pacid 39236157
Descriptions
- Description 3.5.1.98 - Histone deacetylase / HDAC
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010162 | ISO | PLAZA Integrative Orthology | seed dormancy process | AT2G27840 |
| GO:0030422 | ISO | PLAZA Integrative Orthology | production of siRNA involved in RNA interference | AT2G27840 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G27840 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT2G27840 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR041232 | Nucleoplasmin-like domain |
| Mapman id | Description |
|---|---|
| 12.3.2.2 | Chromatin organisation.post-translational histone modification.histone deacetylation.HD2 histone deacetylase |