Gene: Carub.0004s0118

General Information

Structural Information

Species Capsella rubella
Gene Identifier Carub.0004s0118
Transcript Identifier Carub.0004s0118.1
Gene Type Coding gene
Location scaffold_4 : 417524-418684 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000171
#Genes/#Species 2192/38
Phylogenetic origin

ID ORTHO05D000101
#Genes/#Species 2104/34
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id Carub.0004s0118.v1.1
pacid 39237794

Descriptions

Short descriptions
Ortholog descriptions

Description PTHR31790//PTHR31790:SF10 - FAMILY NOT NAMED // F-BOX ASSOCIATED UBIQUITINATION EFFECTOR FAMILY PROTEIN-RELATED

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009408	ISO	PLAZA Integrative Orthology	response to heat	AT3G47020

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0061630	ISO	PLAZA Integrative Orthology	ubiquitin protein ligase activity	AT3G47020

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0010494	ISO	PLAZA Integrative Orthology	cytoplasmic stress granule	AT3G47020

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001810	F-box domain
IPR017451	F-box associated interaction domain
IPR013187	F-box associated domain, type 3
IPR036047	F-box-like domain superfamily

Mapman id	Description
35.1	not assigned.annotated