Gene: Carub.0003s3306

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0003s3306
  • Transcript Identifier Carub.0003s3306.1
  • Gene Type Coding gene
  • Location scaffold_3 : 13998827-14000163 : positive

Gene Family Information

  • ID HOM05D000066
  • #Genes/#Species 3967/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0003s3306.v1.1
  • pacid 39242636
  • synonym Carubv10015626m.g

Descriptions

  • Description PTHR31062:SF47 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 21-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006073
IEA
InterProcellular glucan metabolic process
GO:0005975
IEA
InterProcarbohydrate metabolic process
GO:0010411
IEA
InterProxyloglucan metabolic process
GO:0042546
IEA
InterProcell wall biogenesis
GO:0080022
ISO
PLAZA Integrative Orthologyprimary root development AT2G18800
GO:0042545
ISO
PLAZA Integrative Orthologycell wall modification AT2G18800

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016762
IEA
InterProxyloglucan:xyloglucosyl transferase activity
GO:0004553
IEA
InterProhydrolase activity, hydrolyzing O-glycosyl compounds

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005618
IEA
InterProcell wall
GO:0048046
IEA
InterProapoplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR010713 Xyloglucan endo-transglycosylase, C-terminal
IPR000757 Glycoside hydrolase family 16
IPR013320 Concanavalin A-like lectin/glucanase domain superfamily
IPR016455 Xyloglucan endotransglucosylase/hydrolase
IPR044791 Beta-glucanase/XTH
Mapman id Description
50.2.4 Enzyme classification.EC_2 transferases.EC_2.4 glycosyltransferase