Gene: Carub.0003s3222

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0003s3222
  • Transcript Identifier Carub.0003s3222.1
  • Gene Type Coding gene
  • Location scaffold_3 : 13641914-13644756 : positive

Gene Family Information

  • ID HOM05D000706
  • #Genes/#Species 813/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0003s3222.v1.1
  • pacid 39241606
  • synonym Carubv10012971m.g

Descriptions

  • Description PTHR22884//PTHR22884:SF339 - SET DOMAIN PROTEINS // PHD FINGER, SWIB/MDM2 AND GYF DOMAIN-CONTAINING PROTEIN
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003677
ISO
PLAZA Homology (enrichment)DNA binding HOM05D000706

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003169 GYF domain
IPR035445 GYF-like domain superfamily
IPR003121 SWIB/MDM2 domain
IPR036885 SWIB/MDM2 domain superfamily
IPR001965 Zinc finger, PHD-type
IPR011011 Zinc finger, FYVE/PHD-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
Mapman id Description
35.1 not assigned.annotated