Gene: Carub.0003s2790

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0003s2790
  • Transcript Identifier Carub.0003s2790.1
  • Gene Type Coding gene
  • Location scaffold_3 : 11341203-11352016 : negative

Gene Family Information

  • ID HOM05D000104
  • #Genes/#Species 3097/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0003s2790.v1.1
  • pacid 39242735
  • synonym Carubv10012803m.g

Descriptions

  • Description K11367 - chromodomain-helicase-DNA-binding protein 1 [EC:3.6.4.12] (CHD1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0070615
IEA
InterPronucleosome-dependent ATPase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G13370

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G13370

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000330 SNF2, N-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR016197 Chromo-like domain superfamily
IPR023780 Chromo domain
IPR038718 SNF2-like, N-terminal domain superfamily
IPR025260 Domain of unknown function DUF4208
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR001650 Helicase, C-terminal
IPR000953 Chromo/chromo shadow domain
Mapman id Description
12.4.7.1 Chromatin organisation.nucleosome remodeling.CHD chromatin remodeling activities.CHD1-type chromatin remodeling factor (CHR5)
15.3.4.3.4 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.SAGA complex.component CHR5