Gene: Carub.0003s2425

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0003s2425
  • Transcript Identifier Carub.0003s2425.1
  • Gene Type Coding gene
  • Location scaffold_3 : 8923598-8926500 : negative

Gene Family Information

  • ID HOM05D000029
  • #Genes/#Species 5404/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0003s2425.v1.1
  • pacid 39240407
  • synonym Carubv10016228m.g

Descriptions

  • Description PTHR27000:SF92 - HIGHLY SIMILAR TO RECEPTOR-LIKE PROTEIN KINASE-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006468
IEA
InterProprotein phosphorylation
GO:2000280
ISO
PLAZA Integrative Orthologyregulation of root development AT3G24240
GO:0010074
ISO
PLAZA Integrative Orthologymaintenance of meristem identity AT3G24240
GO:0010082
ISO
PLAZA Integrative Orthologyregulation of root meristem growth AT3G24240
GO:0010449
ISO
PLAZA Integrative Orthologyroot meristem growth AT3G24240
GO:0010078
ISO
PLAZA Integrative Orthologymaintenance of root meristem identity AT3G24240

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004672
IEA
InterProprotein kinase activity
GO:0005524
IEA
InterProATP binding
GO:0005515
IEA
InterProprotein binding
GO:0001653
ISO
PLAZA Integrative Orthologypeptide receptor activity AT3G24240
GO:0042277
ISO
PLAZA Integrative Orthologypeptide binding AT3G24240

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G24240

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000719 Protein kinase domain
IPR003591 Leucine-rich repeat, typical subtype
IPR032675 Leucine-rich repeat domain superfamily
IPR001245 Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR001611 Leucine-rich repeat
IPR011009 Protein kinase-like domain superfamily
Mapman id Description
11.10.1.8.2 Phytohormone action.signalling peptides.NCRP (non-cysteine-rich-peptide) category.GLV/RGF/CLEL-peptide activity.RGF-peptide receptor (RGFR)
18.4.1.11 Protein modification.phosphorylation.TKL protein kinase superfamily.protein kinase (LRR-XI)