Gene: Carub.0003s1732
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0003s1732
- Transcript Identifier Carub.0003s1732.1
- Gene Type Coding gene
- Location scaffold_3 : 6132593-6133251 : positive
Gene Family Information
- ID HOM05D002942
- #Genes/#Species 234/98
- Phylogenetic origin
- ID ORTHO05D003270
- #Genes/#Species 233/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Carub.0003s1732.v1.1
- pacid 39240170
Descriptions
- Description PTHR13301//PTHR13301:SF46 - X-BOX TRANSCRIPTION FACTOR-RELATED // SUBFAMILY NOT NAMED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045944 | IEA | InterPro | positive regulation of transcription by RNA polymerase II | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0080167 | ISO | PLAZA Integrative Orthology | response to karrikin | AT3G17609 |
| GO:0010224 | ISO | PLAZA Integrative Orthology | response to UV-B | AT3G17609 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000981 | IEA | InterPro | DNA-binding transcription factor activity, RNA polymerase II-specific | |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G17609 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT3G17609 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |