Gene: Carub.0003s1656

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0003s1656
  • Transcript Identifier Carub.0003s1656.1
  • Gene Type Coding gene
  • Location scaffold_3 : 5862150-5864641 : positive

Gene Family Information

  • ID HOM05D000338
  • #Genes/#Species 1387/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0003s1656.v1.1
  • pacid 39239865
  • synonym Carubv10013686m.g

Descriptions

  • Description PTHR31339:SF15 - PECTIN LYASE-LIKE SUPERFAMILY PROTEIN-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005975
IEA
InterProcarbohydrate metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004650
IEA
InterPropolygalacturonase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT3G16850

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024535 Pectate lyase superfamily protein
IPR006626 Parallel beta-helix repeat
IPR012334 Pectin lyase fold
IPR000743 Glycoside hydrolase, family 28
IPR011050 Pectin lyase fold/virulence factor
Mapman id Description
50.3.2 Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase