Gene: Carub.0003s1508
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0003s1508
- Transcript Identifier Carub.0003s1508.1
- Gene Type Coding gene
- Location scaffold_3 : 5303224-5304383 : positive
Gene Family Information
- ID HOM05D000803
- #Genes/#Species 737/99
- Phylogenetic origin
- ID ORTHO05D001162
- #Genes/#Species 470/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0003s1508.v1.1
- pacid 39240786
- synonym Carubv10014709m.g
Descriptions
- Description PTHR10438//PTHR10438:SF300 - THIOREDOXIN // THIOREDOXIN M1, CHLOROPLASTIC-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006662 | IEA | InterPro | glycerol ether metabolic process | |
| GO:0006109 | ISO | PLAZA Integrative Orthology | regulation of carbohydrate metabolic process | AT3G15360 |
| GO:0006979 | ISO | PLAZA Integrative Orthology | response to oxidative stress | AT3G15360 |
| GO:0043086 | ISO | PLAZA Integrative Orthology | negative regulation of catalytic activity | AT3G15360 |
| GO:0043085 | ISO | PLAZA Integrative Orthology | positive regulation of catalytic activity | AT3G15360 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0015035 | IEA | InterPro | protein-disulfide reductase activity | |
| GO:0019904 | ISO | PLAZA Integrative Orthology | protein domain specific binding | AT3G15360 |
| GO:0008047 | ISO | PLAZA Integrative Orthology | enzyme activator activity | AT3G15360 |
| GO:0004857 | ISO | PLAZA Integrative Orthology | enzyme inhibitor activity | AT3G15360 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G15360 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT3G15360 |
| GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | AT3G15360 |
| GO:0009535 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid membrane | AT3G15360 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G15360 |
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT3G15360 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 1.1.1.3.22 | Photosynthesis.photophosphorylation.photosystem II.assembly.thioredoxin (TRX-M) |