Gene: Carub.0003s0170
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0003s0170
- Transcript Identifier Carub.0003s0170.1
- Gene Type Coding gene
- Location scaffold_3 : 560177-561586 : positive
Gene Family Information
- ID HOM05D003191
- #Genes/#Species 214/97
- Phylogenetic origin
- ID ORTHO05D003656
- #Genes/#Species 211/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id Carub.0003s0170.v1.1
- pacid 39239443
- synonym Carubv10014344m.g
Descriptions
- Description K00227 - lathosterol oxidase (SC5DL, ERG3)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008610 | IEA | InterPro | lipid biosynthetic process | |
| GO:0016132 | ISO | PLAZA Integrative Orthology | brassinosteroid biosynthetic process | AT3G02580 |
| GO:0016126 | ISO | PLAZA Integrative Orthology | sterol biosynthetic process | AT3G02580 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005506 | IEA | InterPro | iron ion binding | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0000248 | ISO | PLAZA Integrative Orthology | C-5 sterol desaturase activity | AT3G02580 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006694 | Fatty acid hydroxylase |
| Mapman id | Description |
|---|---|
| 5.5.1.5 | Lipid metabolism.phytosterol biosynthesis.plant sterol pathway.delta7-sterol C-5 desaturase |