Gene: Carub.0002s2480

General Information

Structural Information

Species Capsella rubella
Gene Identifier Carub.0002s2480
Transcript Identifier Carub.0002s2480.1
Gene Type Coding gene
Location scaffold_2 : 12964693-12966427 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000382
#Genes/#Species 1280/97
Phylogenetic origin

ID ORTHO05D000391
#Genes/#Species 1009/97
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id Carub.0002s2480.v1.1
pacid 39245329
synonym Carubv10020476m.g

Descriptions

Short descriptions
Ortholog descriptions

Description PTHR22952//PTHR22952:SF203 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // TRANSCRIPTION FACTOR TGA3-RELATED

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006351	IEA	InterPro	transcription, DNA-templated
GO:0006355	IEA	InterPro	regulation of transcription, DNA-templated
GO:0042742	ISO	PLAZA Integrative Orthology	defense response to bacterium	AT1G77920

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0043565	IEA	InterPro	sequence-specific DNA binding
GO:0003700	IEA	InterPro	DNA-binding transcription factor activity
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G77920
GO:0000976	ISO	PLAZA Integrative Orthology	transcription cis-regulatory region binding	AT1G77920

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR025422	Transcription factor TGA like domain
IPR004827	Basic-leucine zipper domain

Mapman id	Description
15.5.4.4.1	RNA biosynthesis.transcriptional regulation.bZIP transcription factor superfamily.TGA transcription factor activity.transcription factor (TGA)