Gene: Carub.0002s2135

General Information

Structural Information

Species Capsella rubella
Gene Identifier Carub.0002s2135
Transcript Identifier Carub.0002s2135.1
Gene Type Coding gene
Location scaffold_2 : 11600237-11601700 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000016
#Genes/#Species 7260/100
Phylogenetic origin

ID ORTHO05D002490
#Genes/#Species 284/95
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id Carub.0002s2135.v1.1
pacid 39243002

Descriptions

Short descriptions
Ortholog descriptions

Description K15506 - cytochrome P450, family 98, subfamily A, polypeptide 8/9 (CYP98A8_9)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008216	ISO	PLAZA Integrative Orthology	spermidine metabolic process	AT1G74550

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0004497	IEA	InterPro	monooxygenase activity
GO:0005506	IEA	InterPro	iron ion binding
GO:0016705	IEA	InterPro	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	IEA	InterPro	heme binding
GO:0072550	ISO	PLAZA Integrative Orthology	triferuloylspermidine meta-hydroxylase activity	AT1G74550
GO:0072547	ISO	PLAZA Integrative Orthology	tricoumaroylspermidine meta-hydroxylase activity	AT1G74550
GO:0072549	ISO	PLAZA Integrative Orthology	monocoumaroyl dicaffeoyl spermidine meta-hydroxylase activity	AT1G74550
GO:0072548	ISO	PLAZA Integrative Orthology	dicoumaroyl monocaffeoyl spermidine meta-hydroxylase activity	AT1G74550

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR036396	Cytochrome P450 superfamily
IPR001128	Cytochrome P450
IPR002401	Cytochrome P450, E-class, group I

Mapman id	Description
21.6.1.2	Cell wall organisation.lignin.monolignol biosynthesis.p-coumaroyl shikimate/quinate 3'-hydroxylase (C3'H)