Gene: Carub.0002s1823
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0002s1823
- Transcript Identifier Carub.0002s1823.1
- Gene Type Coding gene
- Location scaffold_2 : 10424716-10426511 : negative
Gene Family Information
- ID HOM05D000120
- #Genes/#Species 2804/98
- Phylogenetic origin
- ID ORTHO05D000068
- #Genes/#Species 2549/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0002s1823.v1.1
- pacid 39244119
- synonym Carubv10022009m.g
Descriptions
- Description PTHR22298//PTHR22298:SF54 - ENDO-1,4-BETA-GLUCANASE // ENDOGLUCANASE 3-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G71380 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G71380 |
| GO:0005618 | ISO | PLAZA Integrative Orthology | cell wall | AT1G71380 |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT1G71380 |
| GO:0009505 | ISO | PLAZA Integrative Orthology | plant-type cell wall | AT1G71380 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G71380 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.1.3.1 | Cell wall organisation.cellulose.cellulose modification.class-B endo-1,4-beta-glucanase |