Gene: Carub.0002s1338

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0002s1338
  • Transcript Identifier Carub.0002s1338.1
  • Gene Type Coding gene
  • Location scaffold_2 : 8345960-8346703 : negative

Gene Family Information

  • ID HOM05D001330
  • #Genes/#Species 472/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0002s1338.v1.1
  • pacid 39243054
  • synonym Carubv10021016m.g

Descriptions

  • Description 4.1.1.39 - Ribulose-bisphosphate carboxylase / RuBP carboxylase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT1G67090
GO:0110102
ISO
PLAZA Integrative Orthologyribulose bisphosphate carboxylase complex assembly AT1G67090
GO:0015979
ISO
PLAZA Integrative Orthologyphotosynthesis AT1G67090

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G67090
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G67090

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT1G67090
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT1G67090
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT1G67090
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT1G67090
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT1G67090
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G67090
GO:0031977
ISO
PLAZA Integrative Orthologythylakoid lumen AT1G67090
GO:0048046
ISO
PLAZA Integrative Orthologyapoplast AT1G67090

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR024680 Ribulose-1,5-bisphosphate carboxylase small subunit, N-terminal
IPR024681 Ribulose bisphosphate carboxylase, small subunit
IPR000894 Ribulose bisphosphate carboxylase small subunit, domain
IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily
Mapman id Description
1.2.1.1.2 Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat carboxylase/oxygenase (RuBisCo) activity.RuBisCo heterodimer.small subunit