Gene: Carub.0002s0505

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0002s0505
  • Transcript Identifier Carub.0002s0505.1
  • Gene Type Coding gene
  • Location scaffold_2 : 2077812-2079881 : negative

Gene Family Information

  • ID HOM05D000215
  • #Genes/#Species 1875/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0002s0505.v1.1
  • pacid 39245424
  • synonym Carubv10021483m.g

Descriptions

  • Description PTHR23315//PTHR23315:SF116 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 18-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
InterProprotein ubiquitination
GO:0010029
ISO
PLAZA Integrative Orthologyregulation of seed germination AT1G60190

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0005515
IEA
InterProprotein binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR016024 Armadillo-type fold
IPR003613 U box domain
IPR000225 Armadillo
IPR011989 Armadillo-like helical
Mapman id Description
19.2.2.1.4.2.1 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-II ligase