Gene: Carub.0001s4355

General Information

Structural Information

Species Capsella rubella
Gene Identifier Carub.0001s4355
Transcript Identifier Carub.0001s4355.1
Gene Type Coding gene
Location scaffold_1 : 19091690-19093072 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000218
#Genes/#Species 1867/96
Phylogenetic origin

ID ORTHO05D000125
#Genes/#Species 1823/96
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id Carub.0001s4355.v1.1
pacid 39228020
synonym Carubv10012156m.g

Descriptions

Short descriptions
Ortholog descriptions

Description PTHR10666//PTHR10666:SF150 - UBIQUITIN // POLYUBIQUITIN 3

Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT5G37640

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005618	ISO	PLAZA Integrative Orthology	cell wall	AT5G37640
GO:0005730	ISO	PLAZA Integrative Orthology	nucleolus	AT5G37640
GO:0005774	ISO	PLAZA Integrative Orthology	vacuolar membrane	AT5G37640
GO:0005622	ISO	PLAZA Integrative Orthology	intracellular anatomical structure	AT5G37640

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR029071	Ubiquitin-like domain superfamily
IPR019956	Ubiquitin domain
IPR000626	Ubiquitin-like domain

Mapman id	Description
19.2.2.1.1	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-fold protein (UBQ)