Gene: Carub.0001s3925
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0001s3925
- Transcript Identifier Carub.0001s3925.1
- Gene Type Coding gene
- Location scaffold_1 : 17284020-17287762 : negative
Gene Family Information
- ID HOM05D001034
- #Genes/#Species 585/100
- Phylogenetic origin
- ID ORTHO05D000955
- #Genes/#Species 540/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0001s3925.v1.1
- pacid 39228638
- synonym Carubv10012157m.g
Descriptions
- Description PTHR11825:SF53 - BRANCHED-CHAIN-AMINO-ACID AMINOTRANSFERASE 6-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009081 | IEA | InterPro | branched-chain amino acid metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0004084 | IEA | InterPro | branched-chain-amino-acid transaminase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001544 | Aminotransferase class IV |
| IPR036038 | Aminotransferase-like, PLP-dependent enzymes |
| IPR005786 | Branched-chain amino acid aminotransferase II |
| IPR043131 | Branched-chain-amino-acid aminotransferase-like, N-terminal |
| IPR033939 | Branched-chain aminotransferase |
| IPR043132 | Branched-chain-amino-acid aminotransferase-like, C-terminal |
| Mapman id | Description |
|---|---|
| 4.1.2.2.8.6 | Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.isoleucine.valine/leucine/isoleucine aminotransferase |
| 4.1.3.2.4 | Amino acid metabolism.biosynthesis.pyruvate family.pyruvate-derived amino acids.valine/leucine/isoleucine aminotransferase |
| 4.2.7.1 | Amino acid metabolism.degradation.branched-chain amino acid.branched-chain aminotransferase (BCAT) |