Gene: Carub.0001s2625

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0001s2625
  • Transcript Identifier Carub.0001s2625.1
  • Gene Type Coding gene
  • Location scaffold_1 : 9486198-9487300 : positive

Gene Family Information

  • ID HOM05D001118
  • #Genes/#Species 550/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0001s2625.v1.1
  • pacid 39229987
  • synonym Carubv10011072m.g

Descriptions

  • Description PTHR16223//PTHR16223:SF9 - FAMILY NOT NAMED // TRANSCRIPTION FACTOR BHLH139-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT1G27740
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT1G27740
GO:0048766
ISO
PLAZA Integrative Orthologyroot hair initiation AT1G27740
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT1G27740

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT1G27740

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus Os11g0634700

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)