Gene: Carub.0001s2527

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0001s2527
  • Transcript Identifier Carub.0001s2527.1
  • Gene Type Coding gene
  • Location scaffold_1 : 9113456-9115133 : negative

Gene Family Information

  • ID HOM05D000472
  • #Genes/#Species 1118/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0001s2527.v1.1
  • pacid 39229729
  • synonym Carubv10009152m.g

Descriptions

  • Description PTHR16517//PTHR16517:SF31 - TUBBY-RELATED // TUBBY-LIKE F-BOX PROTEIN 1-RELATED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
ISO
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT1G25280
GO:0009620
ISO
PLAZA Integrative Orthologyresponse to fungus AT1G25280

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G25280
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G25280
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G25280
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT1G25280

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR025659 Tubby-like, C-terminal
IPR001810 F-box domain
IPR000007 Tubby, C-terminal
IPR036047 F-box-like domain superfamily
Mapman id Description
15.5.21 RNA biosynthesis.transcriptional regulation.transcription factor (TUB)