Gene: Carub.0001s2291

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0001s2291
  • Transcript Identifier Carub.0001s2291.1
  • Gene Type Coding gene
  • Location scaffold_1 : 8256903-8258751 : negative

Gene Family Information

  • ID HOM05D000937
  • #Genes/#Species 644/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0001s2291.v1.1
  • pacid 39226983
  • synonym Carubv10011523m.g

Descriptions

  • Description 2.6.1.27 - Tryptophan transaminase / Tryptophan aminotransferase
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT1G23320
GO:0080022
ISO
PLAZA Integrative Orthologyprimary root development AT1G23320
GO:0010588
ISO
PLAZA Integrative Orthologycotyledon vascular tissue pattern formation AT1G23320
GO:0009851
ISO
PLAZA Integrative Orthologyauxin biosynthetic process Os01g0169800
GO:0048825
ISO
PLAZA Integrative Orthologycotyledon development AT1G23320
GO:0009723
ISO
PLAZA Integrative Orthologyresponse to ethylene AT1G23320

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0016846
IEA
InterProcarbon-sulfur lyase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015422 Pyridoxal phosphate-dependent transferase, small domain
IPR015424 Pyridoxal phosphate-dependent transferase
IPR037029 Alliinase, N-terminal domain superfamily
IPR015421 Pyridoxal phosphate-dependent transferase, major domain
IPR006948 Alliinase, C-terminal
Mapman id Description
11.2.1.1.1 Phytohormone action.auxin.biosynthesis.indole-3-pyruvic acid (IPyA) pathway.tryptophan aminotransferase