Gene: Carub.0001s1996

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0001s1996
  • Transcript Identifier Carub.0001s1996.1
  • Gene Type Coding gene
  • Location scaffold_1 : 7121138-7123188 : negative

Gene Family Information

  • ID HOM05D000169
  • #Genes/#Species 2209/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0001s1996.v1.1
  • pacid 39229524
  • synonym Carubv10008755m.g

Descriptions

  • Description K10526 - OPC-8:0 CoA ligase 1 (OPCL1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009617
ISO
PLAZA Integrative Orthologyresponse to bacterium AT1G20500
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT1G20500

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016405
ISO
PLAZA Integrative OrthologyCoA-ligase activity AT1G20500

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000873 AMP-dependent synthetase/ligase
IPR025110 AMP-binding enzyme, C-terminal domain
IPR042099 ANL, N-terminal domain
Mapman id Description
11.7.1.7 Phytohormone action.jasmonic acid.biosynthesis.OPC-8:CoA synthetase (ACS)