Gene: Carub.0001s1979

General Information

Structural Information

Species Capsella rubella
Gene Identifier Carub.0001s1979
Transcript Identifier Carub.0001s1979.1
Gene Type Coding gene
Location scaffold_1 : 7057468-7059086 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000373
#Genes/#Species 1301/100
Phylogenetic origin

ID ORTHO05D001763
#Genes/#Species 359/97
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id Carub.0001s1979.v1.1
pacid 39229399
synonym Carubv10009921m.g

Descriptions

Short descriptions
Ortholog descriptions

Description PTHR10869:SF78 - 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN

Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005506	IEA	InterPro	iron ion binding
GO:0016705	IEA	InterPro	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0031418	IEA	InterPro	L-ascorbic acid binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005802	ISO	PLAZA Integrative Orthology	trans-Golgi network	AT1G20270
GO:0005768	ISO	PLAZA Integrative Orthology	endosome	AT1G20270
GO:0005794	ISO	PLAZA Integrative Orthology	Golgi apparatus	AT1G20270

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR044862	Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain
IPR045054	Prolyl 4-hydroxylase
IPR006620	Prolyl 4-hydroxylase, alpha subunit

Mapman id	Description
18.9.1	Protein modification.hydroxylation.prolyl hydroxylase