Gene: Carub.0001s1623
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0001s1623
- Transcript Identifier Carub.0001s1623.1
- Gene Type Coding gene
- Location scaffold_1 : 5692149-5693156 : negative
Gene Family Information
- ID HOM05D000008
- #Genes/#Species 9932/97
- Phylogenetic origin
- ID ORTHO05D000005
- #Genes/#Species 8869/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Carub.0001s1623.v1.1
- pacid 39227008
- synonym Carubv10011190m.g
Descriptions
- Description PTHR10641:SF462 - F3O9.29 PROTEIN-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009809 | ISO | PLAZA Integrative Orthology | lignin biosynthetic process | AT1G16490 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT1G16490 |
| GO:0009416 | ISO | PLAZA Integrative Orthology | response to light stimulus | AT1G16490 |
| GO:2000652 | ISO | PLAZA Integrative Orthology | regulation of secondary cell wall biogenesis | AT1G16490 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003700 | ISO | PLAZA Integrative Orthology | DNA-binding transcription factor activity | AT1G16490 |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT1G16490 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G16490 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.2.1 | RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB) |