Gene: Carub.0001s1314

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0001s1314
  • Transcript Identifier Carub.0001s1314.1
  • Gene Type Coding gene
  • Location scaffold_1 : 4703558-4705395 : negative

Gene Family Information

  • ID HOM05D000557
  • #Genes/#Species 991/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0001s1314.v1.1
  • pacid 39228239
  • synonym Carubv10009662m.g

Descriptions

  • Description PTHR10836:SF53 - GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPC2, CYTOSOLIC
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034059
ISO
PLAZA Integrative Orthologyresponse to anoxia Zm00001eb184000
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT1G13440
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT1G13440
GO:0006096
ISO
PLAZA Integrative Orthologyglycolytic process AT1G13440
GO:0006094
ISO
PLAZA Integrative Orthologygluconeogenesis AT1G13440
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat Zm00001eb184000
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT1G13440
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold Zm00001eb184000
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus Zm00001eb173410
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress Zm00001eb184000
GO:0006006
IEA
InterProglucose metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070403
ISO
PLAZA Integrative OrthologyNAD+ binding Zm00001eb184000
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G13440
GO:0042301
ISO
PLAZA Integrative Orthologyphosphate ion binding Zm00001eb184000
GO:0008270
ISO
PLAZA Integrative Orthologyzinc ion binding AT1G13440
GO:0051287
IEA
InterProNAD binding
GO:0005507
ISO
PLAZA Integrative Orthologycopper ion binding AT1G13440
GO:0004365
ISO
PLAZA Integrative Orthologyglyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity Zm00001eb184000
GO:0050661
IEA
InterProNADP binding
GO:0016620
IEA
InterProoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032991
ISO
PLAZA Integrative Orthologyprotein-containing complex Zm00001eb184000
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT1G13440
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT1G13440
GO:0005777
ISO
PLAZA Integrative Orthologyperoxisome AT1G13440
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G13440
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G13440
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G13440
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G13440
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT1G13440
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G13440

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain
IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family
IPR036291 NAD(P)-binding domain superfamily
IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I
Mapman id Description
2.1.1.4.1 Cellular respiration.glycolysis.cytosolic glycolysis.glyceraldehyde 3-phosphate dehydrogenase activities.NAD-dependent glyceraldehyde 3-phosphate dehydrogenase