Gene: Carub.0001s0854

General Information

Structural Information

Species Capsella rubella
Gene Identifier Carub.0001s0854
Transcript Identifier Carub.0001s0854.1
Gene Type Coding gene
Location scaffold_1 : 3045519-3048812 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001043
#Genes/#Species 582/100
Phylogenetic origin

ID ORTHO05D001555
#Genes/#Species 390/100
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

id Carub.0001s0854.v1.1
pacid 39229022
synonym Carubv10012218m.g

Descriptions

Short descriptions
Ortholog descriptions

Description K08057 - calreticulin (CALR)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006457	IEA	InterPro	protein folding
GO:0006979	ISO	PLAZA Integrative Orthology	response to oxidative stress	AT1G09210
GO:0034976	ISO	PLAZA Integrative Orthology	response to endoplasmic reticulum stress	AT1G09210

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005509	IEA	InterPro	calcium ion binding
GO:0005515	IEA	InterPro	protein binding
GO:0051082	IEA	InterPro	unfolded protein binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005783	IEA	InterPro	endoplasmic reticulum
GO:0005739	ISO	PLAZA Integrative Orthology	mitochondrion	AT1G09210
GO:0005773	ISO	PLAZA Integrative Orthology	vacuole	AT1G09210

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR009033	Calreticulin/calnexin, P domain superfamily
IPR001580	Calreticulin/calnexin
IPR009169	Calreticulin
IPR013320	Concanavalin A-like lectin/glucanase domain superfamily

Mapman id	Description
19.1.1.1.1.2	Protein homeostasis.protein quality control.ER Quality Control (ERQC) machinery.calnexin/calreticulin chaperone system.CNX-CRT cycle.lectin chaperone (CRT)