Gene: CSS0038463
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0038463
- Transcript Identifier CSS0038463.1
- Gene Type Coding gene
- Location Chr6 : 179190176-179190481 : positive
Gene Family Information
- ID HOM05D000057
- #Genes/#Species 4281/93
- Phylogenetic origin
- ID ORTHO05D000021
- #Genes/#Species 4050/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid CSS0038463.1
Descriptions
- Description unnamed protein product [Coffea canephora]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009733 | IEA | InterPro | response to auxin | |
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | Solyc01g110630.4 |
| GO:0009734 | ISO | PLAZA Integrative Orthology | auxin-activated signaling pathway | Solyc01g110630.4 |
| GO:0009646 | ISO | PLAZA Integrative Orthology | response to absence of light | AT3G03830 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | Solyc01g110630.4 |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | Solyc01g110630.4 |
| GO:0071472 | ISO | PLAZA Integrative Orthology | cellular response to salt stress | Solyc01g110770.2 |
| GO:0030307 | ISO | PLAZA Integrative Orthology | positive regulation of cell growth | AT5G18010 |
| GO:0010218 | ISO | PLAZA Integrative Orthology | response to far red light | AT4G13790 |
| GO:2000012 | ISO | PLAZA Integrative Orthology | regulation of auxin polar transport | AT5G18010 |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT2G21210 |
| GO:0010114 | ISO | PLAZA Integrative Orthology | response to red light | AT4G13790 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G18020 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT4G38840 |
| GO:0019897 | ISO | PLAZA Integrative Orthology | extrinsic component of plasma membrane | AT5G18010 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003676 | Small auxin-up RNA |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |