Gene: CSS0037852
General Information
Structural Information
- Species Camellia sinensis var. sinensis
- Gene Identifier CSS0037852
- Transcript Identifier CSS0037852.1
- Gene Type Coding gene
- Location Chr12 : 115461503-115463686 : negative
Gene Family Information
- ID HOM05D000890
- #Genes/#Species 673/80
- Phylogenetic origin
- ID ORTHO05D000697
- #Genes/#Species 665/80
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid CSS0037852.1
Descriptions
- Description PsbC, partial (chloroplast) [Persea americana]
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009767 | IEA | InterPro | photosynthetic electron transport chain | |
| GO:0019684 | IEA | InterPro | photosynthesis, light reaction | |
| GO:0009772 | ISO | PLAZA Homology (enrichment) | photosynthetic electron transport in photosystem II | HOM05D000890 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016168 | IEA | InterPro | chlorophyll binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | ATCG00280 |
| GO:0045156 | ISO | PLAZA Homology (enrichment) | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | HOM05D000890 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | ATCG00280 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009521 | IEA | InterPro | photosystem | |
| GO:0016020 | IEA | InterPro | membrane | |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | ATCG00280 |
| GO:0009539 | ISO | PLAZA Integrative Orthology | photosystem II reaction center | ATCG00280 |
| GO:0009534 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid | ATCG00280 |
| GO:0009533 | ISO | PLAZA Integrative Orthology | chloroplast stromal thylakoid | ATCG00280 |
| GO:0010287 | ISO | PLAZA Integrative Orthology | plastoglobule | ATCG00280 |
| GO:0009535 | ISO | PLAZA Integrative Orthology | chloroplast thylakoid membrane | ATCG00280 |
| GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | ATCG00280 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |