Gene: CSS0027452

General Information

Structural Information

Species Camellia sinensis var. sinensis
Gene Identifier CSS0027452
Transcript Identifier CSS0027452.1
Gene Type Coding gene
Location Chr6 : 59928622-59932106 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000809
#Genes/#Species 730/100
Phylogenetic origin

ID ORTHO05D001196
#Genes/#Species 459/95
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

tid CSS0027452.1

Descriptions

Short descriptions
Ortholog descriptions

Description PREDICTED: VIN3-like protein 1 isoform X1 [Prunus mume]

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0010048	IEA	InterPro	vernalization response
GO:0040029	IEA	InterPro	regulation of gene expression, epigenetic
GO:0009409	ISO	PLAZA Integrative Orthology	response to cold	AT3G24440
GO:0048572	ISO	PLAZA Integrative Orthology	short-day photoperiodism	AT3G24440
GO:0045814	ISO	PLAZA Integrative Orthology	negative regulation of gene expression, epigenetic	AT3G24440
GO:0009909	ISO	PLAZA Integrative Orthology	regulation of flower development	AT3G24440
GO:0031062	ISO	PLAZA Integrative Orthology	positive regulation of histone methylation	AT3G24440
GO:0061087	ISO	PLAZA Integrative Orthology	positive regulation of histone H3-K27 methylation	AT3G24440
GO:0048575	ISO	PLAZA Integrative Orthology	short-day photoperiodism, flowering	AT3G24440
GO:0051571	ISO	PLAZA Integrative Orthology	positive regulation of histone H3-K4 methylation	AT3G24440
GO:0016571	ISO	PLAZA Integrative Orthology	histone methylation	AT3G24440

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT3G24440
GO:0016607	ISO	PLAZA Integrative Orthology	nuclear speck	AT3G24440
GO:0005677	ISO	PLAZA Integrative Orthology	chromatin silencing complex	AT3G24440

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR003961	Fibronectin type III
IPR036116	Fibronectin type III superfamily
IPR013783	Immunoglobulin-like fold
IPR032881	Oberon, PHD finger domain
IPR044514	Vernalization insensitive 3-like

Mapman id	Description
12.3.3.2.1.2.2	Chromatin organisation.post-translational histone modification.histone lysine methylation.class-I histone methyltransferase activities.PRC2 histone methylation complex.associated protein factors.PRC2-VRN-interacting factor (VIN3/VEL)